In the typical sequence of parse-transform-render the most efficient place to transform coordinate values is deep within the parser immediately after values have been read (this would avoid a second pass over whatever structure is used to back geometries). To accomplish this transform during parsing, we could add back parser read options to pass the transform function around.
Until then, a transform method on geometries is straightforward to implement. This means we do a second pass through coordinate structures to transform, but this is typically done only once immediately after parsing.
Its not clear that we will be able to leverage the Float64Array. It may also be that the overhead of constructing these small arrays negates any benefit of faster access. And for all coordinate arrays, we'll need arrays that grow/shrink.